Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3521 (argD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3521
Name
argD
Replicon chromosome
Genomic location 4059688 - 4060905 (- strand)

Cross-References

RefSeq YP_275669.1
GI 71735717
EC Number 2.6.1.11
EC Number 2.6.1.17
Entrez 3558069
INSDC AAZ35481.1
NCBI Locus Tag PSPPH_3521
UniParc UPI0000575C71
UniProtKB Acc Q48G16
UniProtKB ID Q48G16_PSE14
UniRef100 UniRef100_Q48G16
UniRef50 UniRef50_P40732
UniRef90 UniRef90_Q885K0

Product

Feature Type CDS
Coding Frame 1
Product Name
bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -5.81
Kyte-Doolittle Hydrophobicity Value 0.024
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 6.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000862 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3521
Search term: argD

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 9.0e-60
Percent Identity: 34.8

References

No references are associated with this feature.