Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3717 (rumA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_3717
|
| Name |
rumA
|
| Replicon | chromosome |
| Genomic location | 4264108 - 4265463 (- strand) |
Cross-References
| RefSeq | YP_275859.1 |
| GI | 71734365 |
| EC Number | 2.1.1.- |
| Entrez | 3556670 |
| INSDC | AAZ34129.1 |
| NCBI Locus Tag | PSPPH_3717 |
| UniParc | UPI0000575D24 |
| UniProtKB Acc | Q48FH7 |
| UniProtKB ID | RLMD_PSE14 |
| UniRef100 | UniRef100_Q48FH7 |
| UniRef50 | UniRef50_Q4K898 |
| UniRef90 | UniRef90_Q48FH7 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
23S rRNA 5-methyluridine methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.45 |
| Kyte-Doolittle Hydrophobicity Value | -0.068 |
| Molecular Weight (kDa) | 49488.6 |
| Isoelectric Point (pI) | 8.09 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 551 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000899 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_3717
Search term: rumA
Search term: 23S rRNA 5-methyluridine methyltransferase
|
Human Homologs
References
No references are associated with this feature.