Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3784

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3784
Name
Replicon chromosome
Genomic location 4334180 - 4335136 (+ strand)

Cross-References

RefSeq YP_275924.1
GI 71737250
Entrez 3559653
INSDC AAZ37014.1
NCBI Locus Tag PSPPH_3784
UniParc UPI0000575D5E
UniProtKB Acc Q48FB3
UniProtKB ID Q48FB3_PSE14
UniRef100 UniRef100_Q48FB3
UniRef50 UniRef50_Q88NK3
UniRef90 UniRef90_Q87Y23

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -12.16
Kyte-Doolittle Hydrophobicity Value -0.478
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000921 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3784
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.