Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4717 (bioD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4717
Name
bioD
Replicon chromosome
Genomic location 5354540 - 5355220 (- strand)

Cross-References

RefSeq YP_276818.1
GI 71735684
EC Number 6.3.3.3
Entrez 3558032
INSDC AAZ35448.1
NCBI Locus Tag PSPPH_4717
UniParc UPI0000576080
UniProtKB Acc Q48CS5
UniProtKB ID Q48CS5_PSE14
UniRef100 UniRef100_Q48CS5
UniRef50 UniRef50_W7PQT1
UniRef90 UniRef90_Q48CS5

Product

Feature Type CDS
Coding Frame 1
Product Name
dithiobiotin synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -7.95
Kyte-Doolittle Hydrophobicity Value 0.348
Molecular Weight (kDa) 23.5
Isoelectric Point (pI) 4.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 408 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000491 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4717
Search term: bioD

Human Homologs

References

No references are associated with this feature.