Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4726
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_4726
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5363954 - 5364985 (- strand) |
Cross-References
| RefSeq | YP_276827.1 |
| GI | 71737518 |
| Entrez | 3559928 |
| INSDC | AAZ37282.1 |
| NCBI Locus Tag | PSPPH_4726 |
| UniParc | UPI0000576089 |
| UniProtKB Acc | Q48CR6 |
| UniProtKB ID | Q48CR6_PSE14 |
| UniRef100 | UniRef100_Q48CR6 |
| UniRef50 | UniRef50_U1H6L5 |
| UniRef90 | UniRef90_D7I614 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.78 |
| Kyte-Doolittle Hydrophobicity Value | -0.040 |
| Molecular Weight (kDa) | 37.1 |
| Isoelectric Point (pI) | 7.57 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016906 (169 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_4726
Search term: ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value:
1.9e-23
Percent Identity:
36.2
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value:
1.9e-23
Percent Identity:
32.7
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value:
1.9e-23
Percent Identity:
32.7
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value:
1.9e-23
Percent Identity:
36.2
|
References
No references are associated with this feature.