Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4726

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4726
Name
Replicon chromosome
Genomic location 5363954 - 5364985 (- strand)

Cross-References

RefSeq YP_276827.1
GI 71737518
Entrez 3559928
INSDC AAZ37282.1
NCBI Locus Tag PSPPH_4726
UniParc UPI0000576089
UniProtKB Acc Q48CR6
UniProtKB ID Q48CR6_PSE14
UniRef100 UniRef100_Q48CR6
UniRef50 UniRef50_U1H6L5
UniRef90 UniRef90_D7I614

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.78
Kyte-Doolittle Hydrophobicity Value -0.040
Molecular Weight (kDa) 37.1
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016906 (158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4726

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value: 2.0e-23
Percent Identity: 36.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 2.0e-23
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value: 2.0e-23
Percent Identity: 36.2
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 2.0e-23
Percent Identity: 32.7

References

No references are associated with this feature.