Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4730
Name
Replicon chromosome
Genomic location 5367633 - 5368805 (- strand)

Cross-References

RefSeq YP_276831.1
GI 71734264
Entrez 3556569
INSDC AAZ34028.1
NCBI Locus Tag PSPPH_4730
UniParc UPI000057608D
UniProtKB Acc Q48CR2
UniProtKB ID Q48CR2_PSE14
UniRef100 UniRef100_Q48CR2
UniRef50 UniRef50_E2XTN4
UniRef90 UniRef90_Q88AA7

Product

Feature Type CDS
Coding Frame 1
Product Name
LacI family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.83
Kyte-Doolittle Hydrophobicity Value -0.025
Molecular Weight (kDa) 42452.4
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 375 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017277 (58 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4730

Human Homologs

References

No references are associated with this feature.