Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4765
Name
Replicon chromosome
Genomic location 5409325 - 5409843 (- strand)

Cross-References

RefSeq YP_276865.1
GI 71733678
Entrez 3555968
INSDC AAZ33442.1
NCBI Locus Tag PSPPH_4765
UniParc UPI00005760AA
UniProtKB Acc Q48CM8
UniProtKB ID Q48CM8_PSE14
UniRef100 UniRef100_Q48CM8
UniRef50 UniRef50_Q4K4S1
UniRef90 UniRef90_Q88AE6

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 1.65
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 19.5
Isoelectric Point (pI) 8.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4765

Human Homologs

References

No references are associated with this feature.