Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4801

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4801
Name
Replicon chromosome
Genomic location 5446674 - 5449367 (+ strand)

Cross-References

RefSeq YP_276900.1
GI 71733928
Entrez 3556228
INSDC AAZ33692.1
NCBI Locus Tag PSPPH_4801
UniParc UPI00005760C9
UniProtKB Acc Q48CJ3
UniProtKB ID Q48CJ3_PSE14
UniRef100 UniRef100_F3ECZ8
UniRef50 UniRef50_Q4KJD2
UniRef90 UniRef90_D7HUZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
sensory box-containing diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -17.88
Kyte-Doolittle Hydrophobicity Value -0.330
Molecular Weight (kDa) 100.6
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 486 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004624 (522 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4801

Human Homologs

References

No references are associated with this feature.