Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_A0062

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_A0062
Name
Replicon large plasmid
Genomic location 50672 - 51670 (+ strand)

Cross-References

RefSeq YP_272178.1
GI 71725163
Entrez 3555284
INSDC AAZ37963.1
NCBI Locus Tag PSPPH_A0062
UniParc UPI0000574D92
UniProtKB Acc Q48BA9
UniProtKB ID Q48BA9_PSE14
UniRef100 UniRef100_Q48BA9
UniRef50 UniRef50_P37459
UniRef90 UniRef90_Q48BA9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysRfamily transcriptioanl regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.35
Kyte-Doolittle Hydrophobicity Value -0.353
Molecular Weight (kDa) 37.5
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 380 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021100 (2 members)
Putative Inparalogs 1 predicted inparalogs
LysR family transcriptional regulator (PSPPH_2921) 33.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_A0062

Human Homologs

References

No references are associated with this feature.