Pseudomonas fulva 12-X, Psefu_0036

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_0036
Name
Replicon chromosome
Genomic location 36891 - 38267 (+ strand)

Cross-References

RefSeq YP_004472117.1
GI 333898244
EC Number 2.6.1.11
Entrez 10658781
INSDC AEF20023.1
NCBI Locus Tag Psefu_0036
UniParc UPI00020CC551
UniProtKB Acc F6ACL6
UniProtKB ID F6ACL6_PSEF1
UniRef100 UniRef100_F6ACL6
UniRef50 UniRef50_Q1GD43
UniRef90 UniRef90_F6ACL6

Product

Feature Type CDS
Coding Frame 1
Product Name
acetylornithine transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -4.61
Kyte-Doolittle Hydrophobicity Value 0.033
Molecular Weight (kDa) 49175.9
Isoelectric Point (pI) 6.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 636 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016762 (44 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_0036

Human Homologs

Ensembl 110, assembly GRCh38.p14
5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
E-value: 3.0e-35
Percent Identity: 27.5

References

No references are associated with this feature.