Pseudomonas fulva 12-X, Psefu_0251

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_0251
Name
Replicon chromosome
Genomic location 283717 - 285210 (- strand)

Cross-References

RefSeq YP_004472329.1
GI 333898456
Entrez 10657731
INSDC AEF20235.1
NCBI Locus Tag Psefu_0251
UniParc UPI00020CCC25
UniProtKB Acc F6AF37
UniProtKB ID F6AF37_PSEF1
UniRef100 UniRef100_F6AF37
UniRef50 UniRef50_Q4K3N7
UniRef90 UniRef90_Q4K3N7

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein EvpB
Synonyms
Evidence for Translation
Charge (pH 7) -15.00
Kyte-Doolittle Hydrophobicity Value -0.465
Molecular Weight (kDa) 55.7
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 94.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_0251

Human Homologs

References

No references are associated with this feature.