Pseudomonas fulva 12-X, Psefu_1323

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_1323
Name
Replicon chromosome
Genomic location 1448186 - 1448509 (- strand)

Cross-References

RefSeq YP_004473393.1
GI 333899520
Entrez 10656300
INSDC AEF21299.1
NCBI Locus Tag Psefu_1323
UniParc UPI00020CCA12
UniProtKB Acc F6AEG6
UniProtKB ID F6AEG6_PSEF1
UniRef100 UniRef100_F6AEG6
UniRef50 UniRef50_D5AP15
UniRef90 UniRef90_F6AEG6

Product

Feature Type CDS
Coding Frame 1
Product Name
4Fe-4S ferredoxin
Synonyms
Evidence for Translation
Charge (pH 7) -18.79
Kyte-Doolittle Hydrophobicity Value -0.298
Molecular Weight (kDa) 12.3
Isoelectric Point (pI) 3.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7FDR ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII, NA DITHIONITE REDUCED, PH 8.5, 1.4A RESOLUTION, 100 K AZOTOBACTER VINELANDII 1.4 X-RAY DIFFRACTION 90.5
6FD1 ELECTRON TRANSPORT 09/17/97 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII LOW TEMPERATURE, 1.35 A AZOTOBACTER VINELANDII 1.35 X-RAY DIFFRACTION 90.5
6FDR ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII AT 100K, NA DITHIONITE REDUCED AT PH 8.5, RESOLUTION 1.4 A AZOTOBACTER VINELANDII 1.4 X-RAY DIFFRACTION 90.5
5FD1 ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 AZOTOBACTER VINELANDII 1.9 X-RAY DIFFRACTION 90.5
1AXQ ELECTRON TRANSPORT 10/17/97 FERRICYANIDE OXIDIZED FDI AZOTOBACTER VINELANDII 2.1 X-RAY DIFFRACTION 90.5
1FDB ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 AZOTOBACTER VINELANDII 2.2 X-RAY DIFFRACTION 90.5
7FD1 ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII AT PH 8.5, 100 K, 1.35 A AZOTOBACTER VINELANDII 1.3 X-RAY DIFFRACTION 90.5
1FDA ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 AZOTOBACTER VINELANDII 2.1 X-RAY DIFFRACTION 90.5
1FER ELECTRON TRANSFER(IRON-SULFUR PROTEIN) 09/02/92 STRUCTURE AT PH 6.5 OF FERREDOXIN I FROM AZOTOBACTER VINELANDII AT 2.3 ANGSTROMS RESOLUTION AZOTOBACTER VINELANDII 2.3 X-RAY DIFFRACTION 90.5
1F5B ELECTRON TRANSPORT 06/13/00 CRYSTAL STRUCTURE OF F2H FERREDOXIN 1 MUTANT FROM AZOTOBACTER VINELANDII AT 1.75 ANGSTROM RESOLUTION AZOTOBACTER VINELANDII 1.62 X-RAY DIFFRACTION 90.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 300 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002053 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_1323
Search term: 4Fe-4S ferredoxin

Human Homologs

References

No references are associated with this feature.