Pseudomonas fulva 12-X, Psefu_1497

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_1497
Name
Replicon chromosome
Genomic location 1615397 - 1616746 (+ strand)

Cross-References

RefSeq YP_004473567.1
GI 333899694
Entrez 10655543
INSDC AEF21473.1
NCBI Locus Tag Psefu_1497
UniParc UPI00020CCEA9
UniProtKB Acc F6AG71
UniProtKB ID F6AG71_PSEF1
UniRef100 UniRef100_F6AG71
UniRef50 UniRef50_Q4K898
UniRef90 UniRef90_F6AG71

Product

Feature Type CDS
Coding Frame 1
Product Name
23S rRNA (uracil-5-)-methyltransferase RumA
Synonyms
Evidence for Translation
Charge (pH 7) 1.97
Kyte-Doolittle Hydrophobicity Value -0.135
Molecular Weight (kDa) 48.9
Isoelectric Point (pI) 7.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 552 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000899 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_1497

Human Homologs

References

No references are associated with this feature.