Pseudomonas fulva 12-X, Psefu_2422

Gene Feature Overview

Strain	Pseudomonas fulva 12-X GCF_000213805.1|latest
Locus Tag	Psefu_2422
Name
Replicon	chromosome
Genomic location	2605786 - 2606574 (+ strand)

Cross-References

RefSeq	YP_004474482.1
GI	333900609
Entrez	10657811
INSDC	AEF22388.1
NCBI Locus Tag	Psefu_2422
UniParc	UPI00020CC805
UniProtKB Acc	F6ADU7
UniProtKB ID	F6ADU7_PSEF1
UniRef100	UniRef100_F6ADU7
UniRef50	UniRef50_S3MEG3
UniRef90	UniRef90_F6ADU7

Product

Feature Type	CDS
Coding Frame	1
Product Name	nucleoside-specific channel-forming protein, Tsx-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	-14.56
Kyte-Doolittle Hydrophobicity Value	-0.173
Molecular Weight (kDa)	29062.3
Isoelectric Point (pI)	4.34

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000163 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psefu_2422 Search term: nucleoside-specific channel-forming protein, Tsx-like protein

Human Homologs

References