Pseudomonas fulva 12-X, Psefu_2539

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_2539
Name
Replicon chromosome
Genomic location 2736127 - 2738748 (- strand)

Cross-References

RefSeq YP_004474598.1
GI 333900725
EC Number 4.2.1.3
Entrez 10654848
INSDC AEF22504.1
NCBI Locus Tag Psefu_2539
UniParc UPI00020CCB8D
UniProtKB Acc F6AES8
UniProtKB ID F6AES8_PSEF1
UniRef100 UniRef100_F6AES8
UniRef50 UniRef50_Q937N8
UniRef90 UniRef90_C1DHB6

Product

Feature Type CDS
Coding Frame 1
Product Name
2-methylisocitrate dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -19.61
Kyte-Doolittle Hydrophobicity Value -0.131
Molecular Weight (kDa) 95131.6
Isoelectric Point (pI) 5.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000767 (1061 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_2539

Human Homologs

Ensembl 110, assembly GRCh38.p14
aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117]
E-value: 3.6e-191
Percent Identity: 41.0
Ensembl 110, assembly GRCh38.p14
aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117]
E-value: 3.6e-191
Percent Identity: 41.0
Ensembl 110, assembly GRCh38.p14
aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117]
E-value: 3.6e-191
Percent Identity: 41.0

References

No references are associated with this feature.