Pseudomonas fulva 12-X, Psefu_2547

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_2547
Name
Replicon chromosome
Genomic location 2745823 - 2746797 (- strand)

Cross-References

RefSeq YP_004474606.1
GI 333900733
Entrez 10655740
INSDC AEF22512.1
NCBI Locus Tag Psefu_2547
UniParc UPI00020CCB95
UniProtKB Acc F6AET6
UniProtKB ID F6AET6_PSEF1
UniRef100 UniRef100_F6AET6
UniRef50 UniRef50_P06614
UniRef90 UniRef90_Q4K8S3

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.23
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 36.1
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5Z4Y DNA BINDING PROTEIN 01/18/18 Crystal structure of PaCysB NTD domain with space group P4 Pseudomonas aeruginosa 2.401 X-RAY DIFFRACTION 98.9
5Z4Z DNA BINDING PROTEIN 01/15/18 Crystal structure of PaCysB NTD domain with space group C2 Pseudomonas aeruginosa 2.053 X-RAY DIFFRACTION 98.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 533 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003639 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_2547

Human Homologs

References

No references are associated with this feature.