Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4
Name
Replicon chromosome
Genomic location 3970 - 6348 (+ strand)

Cross-References

RefSeq YP_004351123.1
GI 330806661
Entrez 10468813
INSDC AEA66119.1
NCBI Locus Tag PSEBR_a4
UniParc UPI0002041F95
UniProtKB Acc F2KAC0
UniProtKB ID F2KAC0_PSEBN
UniRef100 UniRef100_F2KAC0
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q4KKS7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -15.49
Kyte-Doolittle Hydrophobicity Value -0.376
Molecular Weight (kDa) 88751.9
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 4.5e-31
Percent Identity: 24.9

References

No references are associated with this feature.