Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a54

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a54
Name
Replicon chromosome
Genomic location 65276 - 65911 (- strand)

Cross-References

RefSeq YP_004351178.1
GI 330806716
Entrez 10468868
INSDC AEA66174.1
NCBI Locus Tag PSEBR_a54
UniParc UPI0002041FC2
UniProtKB Acc F2KAH5
UniProtKB ID F2KAH5_PSEBN
UniRef100 UniRef100_F2KAH5
UniRef50 UniRef50_A4XP77
UniRef90 UniRef90_F2KAH5

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 3.96
Kyte-Doolittle Hydrophobicity Value 0.043
Molecular Weight (kDa) 22.8
Isoelectric Point (pI) 10.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 51 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002401 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a54
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.