Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a95

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a95
Name
Replicon chromosome
Genomic location 115665 - 116792 (- strand)

Cross-References

RefSeq YP_004351228.1
GI 330806766
Entrez 10468918
INSDC AEA66224.1
NCBI Locus Tag PSEBR_a95
UniParc UPI0002041FF4
UniProtKB Acc F2KB35
UniProtKB ID F2KB35_PSEBN
UniRef100 UniRef100_A0A0D0SSK3
UniRef50 UniRef50_Q4KKM0
UniRef90 UniRef90_Q4KKM0

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome-c oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7) 0.46
Kyte-Doolittle Hydrophobicity Value -0.078
Molecular Weight (kDa) 42.2
Isoelectric Point (pI) 7.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 407 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000103 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a95

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrially encoded cytochrome c oxidase II [Source:HGNC Symbol;Acc:HGNC:7421]
E-value: 4.7e-27
Percent Identity: 31.5

References

No references are associated with this feature.