Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a126

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a126
Name
Replicon chromosome
Genomic location 153387 - 154727 (- strand)

Cross-References

RefSeq YP_004351262.1
GI 330806800
Entrez 10468952
INSDC AEA66258.1
NCBI Locus Tag PSEBR_a126
UniParc UPI0002042016
UniProtKB Acc F2KB69
UniProtKB ID F2KB69_PSEBN
UniRef100 UniRef100_A0A0D0SYU2
UniRef50 UniRef50_Q88C61
UniRef90 UniRef90_Q3K4F9

Product

Feature Type CDS
Coding Frame 1
Product Name
transporter
Synonyms
Evidence for Translation
Charge (pH 7) -13.16
Kyte-Doolittle Hydrophobicity Value 0.190
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 596 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004927 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a126
Search term: transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14
cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
E-value: 3.2e-10
Percent Identity: 26.3
Ensembl 110, assembly GRCh38.p14
cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
E-value: 3.2e-10
Percent Identity: 26.3

References

No references are associated with this feature.