Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a157

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a157
Name
Replicon chromosome
Genomic location 180623 - 181843 (+ strand)

Cross-References

RefSeq YP_004351294.1
GI 330806832
Entrez 10468984
INSDC AEA66290.1
NCBI Locus Tag PSEBR_a157
UniParc UPI0002042035
UniProtKB Acc F2KD28
UniProtKB ID F2KD28_PSEBN
UniRef100 UniRef100_I4KM35
UniRef50 UniRef50_Q0K3D9
UniRef90 UniRef90_A0A0B7D2I0

Product

Feature Type CDS
Coding Frame 1
Product Name
CoA-transferase
Synonyms
Evidence for Translation
Charge (pH 7) -5.40
Kyte-Doolittle Hydrophobicity Value -0.042
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000437 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a157
Search term: CoA-transferase

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 2.6e-99
Percent Identity: 45.9

References

No references are associated with this feature.