Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a312

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a312
Name
Replicon chromosome
Genomic location 393861 - 395147 (+ strand)

Cross-References

RefSeq YP_004351453.1
GI 330806991
Entrez 10469150
INSDC AEA66449.1
NCBI Locus Tag PSEBR_a312
UniParc UPI0002040BF4
UniProtKB Acc F2KBA7
UniProtKB ID F2KBA7_PSEBN
UniRef100 UniRef100_A0A0D0S8M9
UniRef50 UniRef50_W8YMV7
UniRef90 UniRef90_A0A0B7D4Y4

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -4.28
Kyte-Doolittle Hydrophobicity Value -0.421
Molecular Weight (kDa) 46.7
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a312

Human Homologs

References

No references are associated with this feature.