Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a486

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a486
Name
Replicon chromosome
Genomic location 606823 - 607881 (+ strand)

Cross-References

RefSeq YP_004351635.1
GI 330807173
Entrez 10469334
INSDC AEA66631.1
NCBI Locus Tag PSEBR_a486
UniParc UPI000204132B
UniProtKB Acc F2KAX1
UniProtKB ID F2KAX1_PSEBN
UniRef100 UniRef100_A0A0D0SMG7
UniRef50 UniRef50_P24173
UniRef90 UniRef90_J2YA01

Product

Feature Type CDS
Coding Frame 1
Product Name
Lipopolysaccharide heptosyltransferase-1
Synonyms
Evidence for Translation
Charge (pH 7) 16.77
Kyte-Doolittle Hydrophobicity Value -0.140
Molecular Weight (kDa) 39.2
Isoelectric Point (pI) 10.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004618 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a486

Human Homologs

References

No references are associated with this feature.