Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a653

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a653
Name
Replicon chromosome
Genomic location 813263 - 814291 (- strand)

Cross-References

RefSeq YP_004351805.1
GI 330807343
Entrez 10469506
INSDC AEA66801.1
NCBI Locus Tag PSEBR_a653
UniParc UPI00020419D9
UniProtKB Acc F2KDM3
UniProtKB ID F2KDM3_PSEBN
UniRef100 UniRef100_A0A0D0T6V7
UniRef50 UniRef50_Q889K2
UniRef90 UniRef90_G8Q629

Product

Feature Type CDS
Coding Frame 1
Product Name
transporter
Synonyms
Evidence for Translation
Charge (pH 7) 12.92
Kyte-Doolittle Hydrophobicity Value 0.890
Molecular Weight (kDa) 36.9
Isoelectric Point (pI) 9.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003416 (546 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a653
Search term: transporter

Human Homologs

Ensembl 97, assembly GRCh38.p12
solute carrier family 10 member 7 [Source:HGNC Symbol;Acc:HGNC:23088]
E-value: 3.1e-41
Percent Identity: 33.5

References

No references are associated with this feature.