Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a665

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a665
Name
Replicon chromosome
Genomic location 824971 - 826353 (+ strand)

Cross-References

RefSeq YP_004351817.1
GI 330807355
Entrez 10469518
INSDC AEA66813.1
NCBI Locus Tag PSEBR_a665
UniParc UPI0002041B20
UniProtKB Acc F2KDN5
UniProtKB ID F2KDN5_PSEBN
UniRef100 UniRef100_A0A0D0RU57
UniRef50 UniRef50_A1WJL6
UniRef90 UniRef90_G8Q641

Product

Feature Type CDS
Coding Frame 1
Product Name
transporter
Synonyms
Evidence for Translation
Charge (pH 7) 2.62
Kyte-Doolittle Hydrophobicity Value 0.646
Molecular Weight (kDa) 50.1
Isoelectric Point (pI) 8.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 541 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001513 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a665
Search term: transporter

Human Homologs

Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 2.3e-27
Percent Identity: 26.8
Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 2.3e-27
Percent Identity: 26.8
Ensembl 107, assembly GRCh38.p13
synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
E-value: 2.3e-27
Percent Identity: 26.8

References

No references are associated with this feature.