Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a679

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a679
Name
Replicon chromosome
Genomic location 840049 - 840969 (- strand)

Cross-References

RefSeq YP_004351831.1
GI 330807369
Entrez 10469532
INSDC AEA66827.1
NCBI Locus Tag PSEBR_a679
UniParc UPI0002041B2E
UniProtKB Acc F2KBP5
UniProtKB ID F2KBP5_PSEBN
UniRef100 UniRef100_A0A0D0R238
UniRef50 UniRef50_Q9I6Z9
UniRef90 UniRef90_G8Q655

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.04
Kyte-Doolittle Hydrophobicity Value -0.143
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 7.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 488 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000131 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a679

Human Homologs

References

No references are associated with this feature.