Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a727

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a727
Name
Replicon chromosome
Genomic location 929834 - 930667 (+ strand)

Cross-References

RefSeq YP_004351884.1
GI 330807422
Entrez 10469590
INSDC AEA66880.1
NCBI Locus Tag PSEBR_a727
UniParc UPI0002041DFA
UniProtKB Acc F2KBU8
UniProtKB ID F2KBU8_PSEBN
UniRef100 UniRef100_F2KBU8
UniRef50 UniRef50_A9ALU7
UniRef90 UniRef90_G8Q7C3

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.62
Kyte-Doolittle Hydrophobicity Value -0.080
Molecular Weight (kDa) 30.0
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001308 (593 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a727

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5210]
E-value: 1.4e-19
Percent Identity: 30.3

References

No references are associated with this feature.