Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1000
Name
Replicon chromosome
Genomic location 1269767 - 1271071 (- strand)

Cross-References

RefSeq YP_004352177.1
GI 330807715
Entrez 10469887
NCBI Locus Tag PSEBR_a1000

Product

Feature Type CDS
Coding Frame 1
Product Name
formyl-CoA transferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.39
Kyte-Doolittle Hydrophobicity Value -0.045
Molecular Weight (kDa) 47258.1
Isoelectric Point (pI) 6.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001950 (543 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1000

Human Homologs

Ensembl 97, assembly GRCh38.p12
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 1.4e-54
Percent Identity: 30.6

References

No references are associated with this feature.