Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1130
Name
Replicon chromosome
Genomic location 1409482 - 1410468 (- strand)

Cross-References

RefSeq YP_004352312.1
GI 330807850
Entrez 10470022
INSDC AEA67308.1
NCBI Locus Tag PSEBR_a1130
UniParc UPI00020418B6
UniProtKB Acc F2K8J2
UniProtKB ID F2K8J2_PSEBN
UniRef100 UniRef100_A0A0D0SYL3
UniRef50 UniRef50_C1DSP6
UniRef90 UniRef90_Q4KHB2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.74
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 36523.6
Isoelectric Point (pI) 7.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 543 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002230 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1130

Human Homologs

References

No references are associated with this feature.