Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1178

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1178
Name
Replicon chromosome
Genomic location 1462717 - 1463316 (- strand)

Cross-References

RefSeq YP_004352360.1
GI 330807898
Entrez 10470072
INSDC AEA67356.1
NCBI Locus Tag PSEBR_a1178
UniParc UPI0002041A06
UniProtKB Acc F2K8P0
UniProtKB ID F2K8P0_PSEBN
UniRef100 UniRef100_A0A0D0SPZ1
UniRef50 UniRef50_M5CV01
UniRef90 UniRef90_S6IA99

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.08
Kyte-Doolittle Hydrophobicity Value 0.203
Molecular Weight (kDa) 21.0
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 119 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001028 (423 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1178

Human Homologs

References

No references are associated with this feature.