Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1265
Name
Replicon chromosome
Genomic location 1561075 - 1561935 (+ strand)

Cross-References

RefSeq YP_004352449.1
GI 330807987
Entrez 10470161
INSDC AEA67445.1
NCBI Locus Tag PSEBR_a1265
UniParc UPI0002041E14
UniProtKB Acc F2KD05
UniProtKB ID F2KD05_PSEBN
UniRef100 UniRef100_A0A0D0SSB1
UniRef50 UniRef50_Q8VPF3
UniRef90 UniRef90_D7I4F2

Product

Feature Type CDS
Coding Frame 1
Product Name
glutaconate CoA-transferase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -2.51
Kyte-Doolittle Hydrophobicity Value -0.027
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 6.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 120 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000225 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1265

Human Homologs

References

No references are associated with this feature.