Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_cmegm34

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_cmegm34
Name
Replicon chromosome
Genomic location 1894453 - 1894731 (+ strand)

Cross-References

RefSeq YP_004352756.1
GI 330808294
Entrez 10470470
INSDC AEA67752.1
NCBI Locus Tag PSEBR_cmegm34
UniParc UPI000204137C
UniProtKB Acc F2KEB6
UniProtKB ID F2KEB6_PSEBN
UniRef100 UniRef100_A0A0D0S9Y7
UniRef50 UniRef50_E2XNN0
UniRef90 UniRef90_W8Q9W8

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 4.31
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 10.0
Isoelectric Point (pI) 8.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 7 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021897 (76 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_cmegm34
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.