Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1556

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1556
Name
Replicon chromosome
Genomic location 1895604 - 1896653 (+ strand)

Cross-References

RefSeq YP_004352759.1
GI 330808297
Entrez 10470473
INSDC AEA67755.1
NCBI Locus Tag PSEBR_a1556
UniParc UPI00020414C0
UniProtKB Acc F2KEB9
UniProtKB ID F2KEB9_PSEBN
UniRef100 UniRef100_F2KEB9
UniRef50 UniRef50_G8Q1S0
UniRef90 UniRef90_F2KEB9

Product

Feature Type CDS
Coding Frame 1
Product Name
chain length determinant protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.25
Kyte-Doolittle Hydrophobicity Value -0.240
Molecular Weight (kDa) 39.3
Isoelectric Point (pI) 9.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 27 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000904 (708 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1556

Human Homologs

References

No references are associated with this feature.