Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1561

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1561
Name
Replicon chromosome
Genomic location 1903115 - 1904356 (+ strand)

Cross-References

RefSeq YP_004352765.1
GI 330808303
Entrez 10470479
INSDC AEA67761.1
NCBI Locus Tag PSEBR_a1561
UniParc UPI00020414C6
UniProtKB Acc F2KEC5
UniProtKB ID F2KEC5_PSEBN
UniRef100 UniRef100_F2KEC5
UniRef50 UniRef50_F2KEC5
UniRef90 UniRef90_F2KEC5

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.88
Kyte-Doolittle Hydrophobicity Value 0.684
Molecular Weight (kDa) 46.5
Isoelectric Point (pI) 9.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Nonpathogenic
Found only in nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG028759 (3 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1561
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.