Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1683

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1683
Name
Replicon chromosome
Genomic location 2050555 - 2051145 (+ strand)

Cross-References

RefSeq YP_004352893.1
GI 330808431
Entrez 10470607
INSDC AEA67889.1
NCBI Locus Tag PSEBR_a1683
UniParc UPI00020418D8
UniProtKB Acc F2KEH3
UniProtKB ID F2KEH3_PSEBN
UniRef100 UniRef100_J2EXU1
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_I2BLX6

Product

Feature Type CDS
Coding Frame 1
Product Name
ECF sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.658
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 8.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 468 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1683

Human Homologs

References

No references are associated with this feature.