Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2196

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a2196
Name
Replicon	chromosome
Genomic location	2714407 - 2715927 (- strand)

Cross-References

RefSeq	YP_004353472.1
GI	330809010
Entrez	10471190
INSDC	AEA68468.1
NCBI Locus Tag	PSEBR_a2196
UniParc	UPI0002041A30
UniProtKB Acc	F2KGK9
UniProtKB ID	F2KGK9_PSEBN
UniRef100	UniRef100_F2KGK9
UniRef50	UniRef50_D8J196
UniRef90	UniRef90_A0A0D0R8D3

Product

Feature Type	CDS
Coding Frame	1
Product Name	peptide ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.40
Kyte-Doolittle Hydrophobicity Value	-0.356
Molecular Weight (kDa)	56469.5
Isoelectric Point (pI)	6.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 519 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017935 (39 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a2196 Search term: peptide ABC transporter substrate-binding protein

Human Homologs

References