Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3054

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3054
Name
Replicon chromosome
Genomic location 3774504 - 3775244 (- strand)

Cross-References

RefSeq YP_004354365.1
GI 330809903
Entrez 10472086
INSDC AEA69361.1
NCBI Locus Tag PSEBR_a3054
UniParc UPI0002041292
UniProtKB Acc F2KHS5
UniProtKB ID F2KHS5_PSEBN
UniRef100 UniRef100_A0A0D0STK6
UniRef50 UniRef50_D8ISK7
UniRef90 UniRef90_J3EYT4

Product

Feature Type CDS
Coding Frame 1
Product Name
IclR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.31
Kyte-Doolittle Hydrophobicity Value -0.041
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 8.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 202 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG029111 (11 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3054

Human Homologs

References

No references are associated with this feature.