Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3056

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3056
Name
Replicon chromosome
Genomic location 3776485 - 3777858 (+ strand)

Cross-References

RefSeq YP_004354367.1
GI 330809905
Entrez 10472088
INSDC AEA69363.1
NCBI Locus Tag PSEBR_a3056
UniParc UPI00020413C7
UniProtKB Acc F2KHS7
UniProtKB ID F2KHS7_PSEBN
UniRef100 UniRef100_A0A0D0SN87
UniRef50 UniRef50_D8ISJ7
UniRef90 UniRef90_G8PZS6

Product

Feature Type CDS
Coding Frame 1
Product Name
aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -0.47
Kyte-Doolittle Hydrophobicity Value -0.004
Molecular Weight (kDa) 48.7
Isoelectric Point (pI) 6.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022260 (24 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3056
Search term: aminotransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14
5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
E-value: 4.7e-41
Percent Identity: 29.7

References

No references are associated with this feature.