Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3070

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3070
Name
Replicon chromosome
Genomic location 3794009 - 3794887 (+ strand)

Cross-References

RefSeq YP_004354381.1
GI 330809919
Entrez 10472102
INSDC AEA69377.1
NCBI Locus Tag PSEBR_a3070
UniParc UPI00020413D5
UniProtKB Acc F2KHU1
UniProtKB ID F2KHU1_PSEBN
UniRef100 UniRef100_I4KQG5
UniRef50 UniRef50_Q2KUF6
UniRef90 UniRef90_G8PZR0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.35
Kyte-Doolittle Hydrophobicity Value 0.034
Molecular Weight (kDa) 32.1
Isoelectric Point (pI) 7.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 511 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000789 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3070

Human Homologs

References

No references are associated with this feature.