Strain |
Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest |
Locus Tag |
PSEBR_a3073
|
Name |
|
Replicon | chromosome |
Genomic location | 3797421 - 3800600 (+ strand) |
RefSeq | YP_004354384.1 |
GI | 330809922 |
Entrez | 10472105 |
INSDC | AEA69380.1 |
NCBI Locus Tag | PSEBR_a3073 |
UniParc | UPI00020413D8 |
UniProtKB Acc | F2KHU4 |
UniProtKB ID | F2KHU4_PSEBN |
UniRef100 | UniRef100_A0A0D0SU75 |
UniRef50 | UniRef50_Q880Q4 |
UniRef90 | UniRef90_Q880Q4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RND multidrug efflux transporter MexF
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -7.15 |
Kyte-Doolittle Hydrophobicity Value | 0.324 |
Molecular Weight (kDa) | 114.8 |
Isoelectric Point (pI) | 5.68 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1341.6 | 66.95 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSEBR_a3073
Search term: RND multidrug efflux transporter MexF
|