Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3374

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a3374
Name
Replicon	chromosome
Genomic location	4170423 - 4170950 (+ strand)

Cross-References

RefSeq	YP_004354700.1
GI	330810238
Entrez	10472421
INSDC	AEA69696.1
NCBI Locus Tag	PSEBR_a3374
UniParc	UPI0002040A18
UniProtKB Acc	F2KIA0
UniProtKB ID	F2KIA0_PSEBN
UniRef100	UniRef100_A0A0D0SSZ8
UniRef50	UniRef50_F2N5K2
UniRef90	UniRef90_G8QBB4

Product

Feature Type	CDS
Coding Frame	1
Product Name	C4-dicarboxylate transporter small subunit, permease
Synonyms
Evidence for Translation
Charge (pH 7)	1.61
Kyte-Doolittle Hydrophobicity Value	0.722
Molecular Weight (kDa)	19.5
Isoelectric Point (pI)	8.07

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 110 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015289 (137 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a3374 Search term: C4-dicarboxylate transporter small subunit, permease

Human Homologs

References