Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3449

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3449
Name
Replicon chromosome
Genomic location 4250890 - 4252194 (+ strand)

Cross-References

RefSeq YP_004354778.1
GI 330810316
Entrez 10472499
INSDC AEA69774.1
NCBI Locus Tag PSEBR_a3449
UniParc UPI0002040CDA
UniProtKB Acc F2K7V3
UniProtKB ID F2K7V3_PSEBN
UniRef100 UniRef100_F2K7V3
UniRef50 UniRef50_Q398M5
UniRef90 UniRef90_G8QAF2

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.42
Kyte-Doolittle Hydrophobicity Value 0.025
Molecular Weight (kDa) 47499.9
Isoelectric Point (pI) 4.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019003 (47 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3449

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.9e-13
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.9e-13
Percent Identity: 29.6
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 8.9e-13
Percent Identity: 29.6

References

No references are associated with this feature.