Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3559

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3559
Name
Replicon chromosome
Genomic location 4369817 - 4371097 (- strand)

Cross-References

RefSeq YP_004354902.1
GI 330810440
Entrez 10472623
INSDC AEA69898.1
NCBI Locus Tag PSEBR_a3559
UniParc UPI000204114D
UniProtKB Acc F2KIM2
UniProtKB ID F2KIM2_PSEBN
UniRef100 UniRef100_A0A0D0SXC4
UniRef50 UniRef50_Q8RH11
UniRef90 UniRef90_Q3KA84

Product

Feature Type CDS
Coding Frame 1
Product Name
seryl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -12.17
Kyte-Doolittle Hydrophobicity Value -0.270
Molecular Weight (kDa) 47.1
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 654 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002939 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3559

Human Homologs

Ensembl 110, assembly GRCh38.p14
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value: 1.1e-52
Percent Identity: 35.8

References

No references are associated with this feature.