Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3890
Name
Replicon chromosome
Genomic location 4757016 - 4757684 (- strand)

Cross-References

RefSeq YP_004355284.1
GI 330810822
Entrez 10473015
INSDC AEA70280.1
NCBI Locus Tag PSEBR_a3890
UniParc UPI0002041ED6
UniProtKB Acc F2KJQ4
UniProtKB ID F2KJQ4_PSEBN
UniRef100 UniRef100_A0A0D0SY22
UniRef50 UniRef50_Q0C2L9
UniRef90 UniRef90_Q4K9H1

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpR family response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.87
Kyte-Doolittle Hydrophobicity Value -0.260
Molecular Weight (kDa) 24.8
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002900 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3890

Human Homologs

References

No references are associated with this feature.