Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4259

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4259
Name
Replicon chromosome
Genomic location 5185464 - 5186834 (- strand)

Cross-References

RefSeq YP_004355672.1
GI 330811210
Entrez 10473417
INSDC AEA70668.1
NCBI Locus Tag PSEBR_a4259
UniParc UPI000204182E
UniProtKB Acc F2KKL2
UniProtKB ID F2KKL2_PSEBN
UniRef100 UniRef100_A0A0D0R9A9
UniRef50 UniRef50_Q4K898
UniRef90 UniRef90_J2EX03

Product

Feature Type CDS
Coding Frame 1
Product Name
23S rRNA (uracil-5-)-methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -0.02
Kyte-Doolittle Hydrophobicity Value -0.077
Molecular Weight (kDa) 49.8
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 550 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000899 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4259

Human Homologs

References

No references are associated with this feature.