Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4287

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4287
Name
Replicon chromosome
Genomic location 5216075 - 5216482 (- strand)

Cross-References

RefSeq YP_004355700.1
GI 330811238
Entrez 10473445
INSDC AEA70696.1
NCBI Locus Tag PSEBR_a4287
UniParc UPI0002041967
UniProtKB Acc F2KKP0
UniProtKB ID F2KKP0_PSEBN
UniRef100 UniRef100_A0A0D0SZ62
UniRef50 UniRef50_C5BRR7
UniRef90 UniRef90_G8Q5Q2

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar basal-body rod protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.29
Kyte-Doolittle Hydrophobicity Value -0.582
Molecular Weight (kDa) 15.0
Isoelectric Point (pI) 5.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 222 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001039 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4287

Human Homologs

References

No references are associated with this feature.