Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5159

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5159
Name
Replicon chromosome
Genomic location 6250248 - 6250967 (+ strand)

Cross-References

RefSeq YP_004356633.1
GI 330812171
Entrez 10474404
INSDC AEA71629.1
NCBI Locus Tag PSEBR_a5159
UniParc UPI00020411A4
UniProtKB Acc F2KM86
UniProtKB ID F2KM86_PSEBN
UniRef100 UniRef100_I4K087
UniRef50 UniRef50_P00437
UniRef90 UniRef90_G8Q1A7

Product

Feature Type CDS
Coding Frame 1
Product Name
protocatechuate 34-dioxygenase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) 8.30
Kyte-Doolittle Hydrophobicity Value -0.493
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 9.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 128 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000151 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5159

Human Homologs

References

No references are associated with this feature.