Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5174

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5174
Name
Replicon chromosome
Genomic location 6269748 - 6271037 (- strand)

Cross-References

RefSeq YP_004356648.1
GI 330812186
Entrez 10474419
INSDC AEA71644.1
NCBI Locus Tag PSEBR_a5174
UniParc UPI00020411B2
UniProtKB Acc F2KMA1
UniProtKB ID F2KMA1_PSEBN
UniRef100 UniRef100_A0A0D0T2K8
UniRef50 UniRef50_K9NQ36
UniRef90 UniRef90_K9NQ36

Product

Feature Type CDS
Coding Frame 1
Product Name
GGDEF domain-containing membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.25
Kyte-Doolittle Hydrophobicity Value 0.202
Molecular Weight (kDa) 48.1
Isoelectric Point (pI) 9.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 451 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015098 (225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5174

Human Homologs

References

No references are associated with this feature.