Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5548

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5548
Name
Replicon chromosome
Genomic location 6687206 - 6687922 (- strand)

Cross-References

RefSeq YP_004357082.1
GI 330812620
Entrez 10474853
INSDC AEA72078.1
NCBI Locus Tag PSEBR_a5548
UniParc UPI0002040A99
UniProtKB Acc F2K701
UniProtKB ID F2K701_PSEBN
UniRef100 UniRef100_A0A0D0T1F0
UniRef50 UniRef50_G8Q706
UniRef90 UniRef90_G8Q706

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.01
Kyte-Doolittle Hydrophobicity Value 0.001
Molecular Weight (kDa) 25.3
Isoelectric Point (pI) 8.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5548

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 2.3e-11
Percent Identity: 29.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 2.3e-11
Percent Identity: 29.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 2.3e-11
Percent Identity: 29.1

References

No references are associated with this feature.