Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5594

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5594
Name
Replicon chromosome
Genomic location 6756368 - 6757330 (+ strand)

Cross-References

RefSeq YP_004357133.1
GI 330812671
Entrez 10474904
INSDC AEA72129.1
NCBI Locus Tag PSEBR_a5594
UniParc UPI0002040D5B
UniProtKB Acc F2K752
UniProtKB ID F2K752_PSEBN
UniRef100 UniRef100_S6IA29
UniRef50 UniRef50_Q4K3G6
UniRef90 UniRef90_G8Q840

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.54
Kyte-Doolittle Hydrophobicity Value -0.095
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 7.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 545 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004987 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5594

Human Homologs

References

No references are associated with this feature.